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SRX275443: GSM1133671: Sample_5_0; Homo sapiens; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 15.9M spots, 3.2G bases, 2Gb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Identification of differentially expressed transcripts and pathways one week and six months following implant of left ventricular devices
show Abstracthide Abstract
A specific set of genes involved in regulating cellular immune response, antigen presentation, and T cell activation and survival were down-regulated 7 days after LVAD placement. 6 months following LVAD placement, the expression levels of these genes were significantly increased; yet importantly, remained significantly lower than age and sex-matched samples from healthy controls. Overall design: Examination of the effect of LVAD implant on peripheral blood transcriptome. Blood was drawn before LVAD placement, 7 days post implant, and 180 days post implant. RNA sequencing was performaed on all samples.
Sample: Sample_5_0
SAMN02117504 • SRS418749 • All experiments • All runs
Organism: Homo sapiens
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: RNA extraction from whole blood was carried out per the manufacturer’s instructions using the PreAnalytiX PAXgene Blood RNA Kit, Version 2 from Qiagen. Libraries were created using the Illumina TruSeq RNA Sample Preparation kit.
Experiment attributes:
GEO Accession: GSM1133671
Links:
External link:
Runs: 1 run, 15.9M spots, 3.2G bases, 2Gb
Run# of Spots# of BasesSizePublished
SRR84694615,918,8223.2G2Gb2013-05-08

ID:
390186

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